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Jmol 11.9.13 Prerelease / 11.8.15


Jmol 11.9.13 Prerelease / 11.8.15

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Jmol 11.9.13 Prerelease / 11.8.15 Ranking & Summary

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User Review: 0 (0 times)
File size: 12.5 MB
Platform: Windows All
License: Freeware
Price: FREE
Downloads: 377
Date added: 2009-12-30
Publisher: Egon Willighagen

Jmol 11.9.13 Prerelease / 11.8.15 description

Jmol 11.9.13 Prerelease / 11.8.15 gives you much convenience with a free but useful molecule viewer for students, educators, and researchers in chemistry and biochemistry. It is cross-platform, running on Windows, Mac OS X, and Linux/Unix systems.

  • The JmolApplet is a web browser applet that can be integrated into web pages.
  • The Jmol application is a standalone Java application that runs on the desktop.
  • The JmolViewer is a development tool kit that can be integrated into other Java applications.
Major Features:
  1. Free, open-source software licensed under the GNU Lesser General Public License
  2. Applet, Application, and Systems Integration Component
    • The JmolApplet is a web browser applet that can be integrated into web pages. It is ideal for development of web-based courseware and web-accessible chemical databases. The JmolApplet provides an upgrade path for users of the Chime plug-in.
    • The Jmol application is a standalone Java application that runs on the desktop.
    • The JmolViewer can be integrated as a component into other Java applications.
  3. Multi-language
    • Translated into multiple languages: Catalan (ca), Czech (cs), Danish (da), Dutch (nl), Estonian (et), French (fr), German (de), Hungarian (hu), Italian (it), Korean (ko), Norwegian Bokmal (nb), Polish (pl), Portuguese (pt), Portuguese - Brazil (pt_BR), Russian (ru), Spanish (es), Swedish (sv), Turkish (tr) (in addition to the native English, en-US).
    • Automatically adopts the language of the user's operating system, if it is among the translations available. You can change to another language if desired.
  4. Cross-platform
    • Windows
    • Mac OS X
    • Linux / Unix
  5. Supports all major web browsers
    • Internet Explorer (Win32)
    • Mozilla and Firefox (Win32, OSX, Linux, Unix)
    • Safari (Mac OS X)
    • Opera 7.5.4 (Win32 only)
    • Konqueror (Linux)
    • IceWeasel (Linux)
    • And more.
  6. High-performance 3D rendering with no hardware requirements
    • File formats (see also file formats section within Jmol Wiki):
    • CIF/mmCIF - Crystallographic Information File and Macromolecular Crystallographic Information File, the standards from the International Union of Crystallography
    • CML - Chemical Markup Language
    • CSF - Fujitsu CAChe chemical structure, now Fujitsu Sygress
    • CTFile - Elsevier MDL chemical table
    • GAMESS - General Atomic and Molecular Electronic Structure System output, Gordon Research Group, Iowa State University
    • Gaussian 94/98/03 output - Gaussian, Inc.
    • Ghemical
    • HIN - HyperChem from Hypercube, Inc.
    • Jaguar - Schrodinger, LLC
    • MM1GP - Ghemical molecular mechanics
    • MOL - Elsevier MDL structure
    • MOLPRO - Molpro output
    • MOPAC - MOPAC 93/97/2002 output (public domain) 
    • - MOPAC 2007 (v.7.101) graphf output (.mgf files) (public domain)
    • NWCHEM - NWChem output, Pacific Northwest National Laboratory
    • odydata - Odyssey data, WaveFunction, Inc.
    • PDB - Protein Data Bank, Research Collaboratory for Structural Bioinformatics
    • QOUT - Q-Chem, Inc.
    • SDF - Elsevier MDL structure
    • SHELX - Structural Chemistry Department, University of Göttingen (Germany)
    • SMOL - Spartan data, Wavefunction, Inc.
    • spinput - Spartan data, Wavefunction, Inc.
    • xodydata - Odyssey XML data, WaveFunction, Inc.
    • XYZ - Minnesota Supercomputer Institute XMol file
    • XYZ+vib - XYZ format files with added vibrational vector information
    • XYZ-FAH - Folding@home XYZ file
    • Files which are compressed with gzip will automatically be decompressed
  7. Animations
  8. Vibrations
  9. Basic support for unit cell and symmetry operations
  10. Schematic shapes for secondary structures in biomolecules
  11. Measurements
    • Distance
    • Angle
    • Torsion angle
  12. Support for RasMol/Chime scripting language
  13. JavaScript support library
  14. Exports to .jpg, .png, .ppm, .pdf, and PovRay

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