Unipro UGENE 1.9.2
Unipro UGENE 1.9.2 Ranking & Summary
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User Review: 0 (0 times)
File size: 15.7MB
Platform: Windows 7, Windows Vista, Windows XP
Date added: 2011-03-23
Publisher: Unipro, Russia
Unipro UGENE 1.9.2 description
Unipro UGENE 1.9.2 is designed to be an effective and useful cross-platform genome analysis suite that works perfectly on Windows, Mac OS or Linux and requires only a few clicks to install.
- Multiple sequence alignment using MUSCLE 3, KAlign, Clustal;
- HMM profiles build and search, based on the source of HMMER 2 and HMMER 3;
- PCR Primers design using Primer 3;
- Cloning in silico capabilities;
- Queries to NCBI BLAST and CDD databases;
- Protein secondary structure prediction using GOR IV and PSIPRED;
- Phylogenetic analysis with Phylip;
- Search for restriction enzymes and integration with REBASE;
- Extremely fast repeat finder;
- DNA reference assembly using Bowtie;
- Search for transcription factor binding sites using SITECON;
- Protein back translation;
- ORF finder;
- Complete Smith-Waterman algorithm implementation;
- Support for external tools: BLAST+, MAFFT, T-Coffee.
- Added auto-annotation high-lighting capabilities
- Added support of export annottions in GFF format
- Added support of lauching workflows in separte processes
- Added multiple optimizations to Genome Aligner
- Fixed problem with project export
- Fixed bug with remote requests to NCBI CDD
- Workflow Designer: added support of FASTA files as queries for Smith-Waterman search
- Workflow Designer: added export/merge annotations workers
- Workflow Designer: fixed bug with iterations (append and rename)
- Added version string and estimated size to uninstall info in Windows "Add/Remove programs"
- and more minor bugfixes... Check bug tracker for details.
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