PhyloSort 1.3 Build 200709021416

PhyloSort is a tool that sorts phylogenetic trees by searching for user-specified subtrees that contain a monophyletic group of interest.
Main features:
- Searching for monophyletic relationship among groups of taxa.
- Filtering by bootstrap support values associated with the monophyletic clades.
- Filtering by tree complexity (number of taxa in a tree).
- Filtering by family complexity (number of genes per taxon in a tree).
- Clustering trees (genes) into tree clusters (gene families).
- Grouping OTUs using a taxonomy reference tree.
- Clean and reusable implementation of common procedures to manipulate tree data structure such as Newick parsing, tree traversal and rerooting.
- Visualizing tree topology using A Tree Viewer (ATV).